BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006D11SP1|AL425535
(501 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1799 242 4e-64
>3x_Contig1799
Length = 39855
Score = 242 bits (112), Expect = 4e-64
Identities = 142/149 (95%), Gaps = 4/149 (2%)
Strand = Plus / Plus
Query: 1 gatcttaatatcaacaccgcattatacctcacctaatatccattcacatattccaccgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30476 gatcttaatatcaacaccgcattatacctcacctaatatccattcacatattccaccgt- 30534
Query: 61 agacaatgacaattaccatagwgttattgtgattctttcgaaaatattttttcaactgca 120
||||||| ||||| |||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 30535 -gacaatg-caatttccat-gtgttattgtgattctttcgaaaatattttttcaactgca 30591
Query: 121 gcctaaaactagtatatatatatatatat 149
|||||||||||||||||||||||||||||
Sbjct: 30592 gcctaaaactagtatatatatatatatat 30620
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.50 0.729 1.41
Gapped
Lambda K H
1.50 0.729 1.41
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 22,669
Number of Sequences: 1807
Number of extensions: 22669
Number of successful extensions: 11295
Number of sequences better than 1.0e-20: 1
length of query: 501
length of database: 10,358,551
effective HSP length: 15
effective length of query: 486
effective length of database: 10,331,446
effective search space: 5021082756
effective search space used: 5021082756
T: 0
A: 40
X1: 5 (10.8 bits)
X2: 13 (28.1 bits)
S1: 11 (24.3 bits)
S2: 46 (100.0 bits)